All functions

clear()

Clear the screen

collect_software_versions()

Collect software versions

ensembl_release_to_archive()

Retrieve Ensembl archive URL

get_ensembl_url()

Format a URL to Ensembl

get_file_extension() remove_extension()

Get or remove the extension of a file

get_mart()

Create a biomaRt connection

headtail()

Get the top and bottom of a data.frame

iteratively_split_df()

Split a data frame into a nested list

kable()

Set default options for a kable

less()

Stream output less-like

load_cached_chunk() load_all_chunks()

Load a cached knitr chunk

log_breaks() major_log_breaks() minor_log_breaks()

Get breaks for a log scale

make_clean_directory()

Create and/or clear out a directory

make_tabs_shortcode()

Make tabs shortcode

numeric_to_si()

Add metric suffixes to numbers

open_x11()

Open X11 on a display

preferred_choice()

Make a ranked choice

print_object_size()

Get the size of an object

read_dotbabs()

Read and parse a .babs file

read_msigdb()

Read files from my MSigDB cache

resize_and_show() set_panel_dims() set_plot_clipping() show_newpage_grid() get_panel_aspect_ratios()

Resize and display a ggplot object

wideScreen() get_screen_width()

Set width of console

write_parameters_file()

Write parameters file