Write metadata to a h5 file

Write metadata to a h5 file

Get dataset meta data

write_metadata(h5_file, metadata, ...)

guess_metadata(seurat)

Arguments

h5_file

Path to h5 file
metadata

A data.frame of meta data
...

Arguments passed to guess_metadata
seurat

Seurat object

Details

Extracts the factor- or character-type variables from the seurat meta data, but it uses !is.numeric!

Functions

  • write_metadata: Write meta data to h5 file

  • guess_metadata: Select non-numeric variables from the meta data slot