faidx
Create a FastA index from a FastA file, providing a .fai file.
Inputs
| Channel name | Description | Type |
|---|---|---|
opt | A map of task-specific variables. | map |
fasta | A FastA file to index. | file |
Outputs
| Emission name | Description | Type | Filename pattern |
|---|---|---|---|
opt | A map of task-specific variables. | map | |
task | YAML-formatted file of task parameters and software versions used by the task. | file | task.yaml |
<fasta>.fai | FastA index file. | file | *.fai |
Tools
samtools
A suite of programs for interacting with high-throughput sequencing data.
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