faidx

Create a FastA index from a FastA file, providing a .fai file.

module

Inputs

Channel nameDescriptionType
optA map of task-specific variables.map
fastaA FastA file to index.file

Outputs

Emission nameDescriptionTypeFilename pattern
optA map of task-specific variables.map
taskYAML-formatted file of task parameters and software versions used by the task.filetask.yaml
<fasta>.faiFastA index file.file*.fai

Tools

samtools

A suite of programs for interacting with high-throughput sequencing data.

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