Seurat

  • make_assay

    Writes assay objects as RDS files for a specified assay type.

    • make_object

      A Seurat object is created from the assays, metadata and miscellaneous objects and written to an RDS file.

      • percentage_feature_set

        Adds a metadata variable that shows the perentage of a cell's data that originates from features that match a regex.

        • write_10x_counts_matrices

          Reads a directory containing Cell Ranger-formatted output into a list of matrices.